This book explains anaerobic respiration and carbohydrate metabolism—glucose, fructose, lactose, mannose, allose, and sorbitol. This text then describes aerobic respiration including the "Nitroso" and "Nitro" groups of genera, and the Knallgas bacteria, which use the reaction between molecular hydrogen and molecular oxygen as their source of energy. This book also explains the microbial transformation of iron as caused by either specific organisms e. Ferrobacillus ferrooxidans or nonspecific organisms. This selection also explains the process of fermentation by Enterobacteriaceae, lactic acid bacteria, and proteolytic clostridia.
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Skip to content. Search for books, journals or webpages C-di-GMP regulates Pseudomonas aeruginosa stress response to tellurite during both planktonic and biofilm modes of growth. Chubukov, V. Transcriptional regulation is insufficient to explain substrate-induced flux changes in Bacillus subtilis. Convergent peripheral pathways catalyze initial glucose catabolism in Pseudomonas putida : genomic and flux analysis. Ding, Y.
Disruption of putrescine biosynthesis in Shewanella oneidensis enhances biofilm cohesiveness and performance in Cr VI immobilization. Fischer, E. Large-scale in vivo flux analysis shows rigidity and suboptimal performance of Bacillus subtilis metabolism. Fuhrer, T. Experimental identification and quantification of glucose metabolism in seven bacterial species. Gu, H. Patterned biofilm formation reveals a mechanism for structural heterogeneity in bacterial biofilms. Langmuir 29, — Guo, W. RSC Adv.
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He, L. WUFlux: an open-source platform for 13 C metabolic flux analysis of bacterial metabolism. BMC Bioinformatics Heffernan, B. Comparison of planktonic and biofilm cultures of Pseudomonas fluorescens DSM cells grown on fluoroacetate. Hollinshead, W. Biofuels Jiao, Y. Characterization of extracellular polymeric substances from acidophilic microbial biofilms.
Lassek, C. Proteome and carbon flux analysis of Pseudomonas aeruginosa clinical isolates from different infection sites. Proteomics 16, — Nikel, P. Pseudomonas putida KT metabolizes glucose through a cycle formed by enzymes of the entner-doudoroff, embden-meyerhof-parnas, and pentose phosphate pathways. Opperman, M. Metabolic flux analyses of Pseudomonas aeruginosa cystic fibrosis isolates. Biofilm formation as microbial development. Pan, J. Reverting antibiotic tolerance of Pseudomonas aeruginosa PAO1 persister cells by Z bromo bromomethylene methylfuran-2 5H -one.
PLoS One 7:e Pantanella, F. Analytical techniques to study microbial biofilm on abiotic surfaces: pros and cons of the main techniques currently in use.
Where bacterial metabolism and virulence intersect | Microbiology Society
Pfaffl, M. Nucleic Acids Res. Ren, D. Micropatterning and its applications in biomedical research. Actuators B Chem. Multiplexed living cells stained with quantum dot bio probes for multiplexed detection of single-cell array. Sauer, K. Pseudomonas aeruginosa displays multiple phenotypes during development as a biofilm. Savli, H. Expression stability of six housekeeping genes: a proposal for resistance gene quantification studies of Pseudomonas aeruginosa by real-time quantitative RT-PCR.
Sivakumar, K. Membrane permeabilization underlies the enhancement of extracellular bioactivity in Shewanella oneidensis by a membrane-spanning conjugated oligoelectrolyte. Sternberg, C. Growing and analyzing biofilms in flow cells. Stettner, A. The cost of efficiency in energy metabolism. Stover, C. Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen. Nature , — Tang, Y. Shewanella oneidensis MR-1 fluxome under various oxygen conditions. Invariability of central metabolic flux distribution in Shewanella oneidensis MR-1 under environmental or genetic perturbations.
Influence of interfaces on microbial activity. Wahl, S. New tools for mass isotopomer data evaluation in 13C flux analysis: mass isotope correction, data consistency checking, and precursor relationships.
Williamson, K. Heterogeneity in Pseudomonas aeruginosa biofilms includes expression of ribosome hibernation factors in the antibiotic-tolerant subpopulation and hypoxia-induced stress response in the metabolically active population. You, L. Metabolic pathway confirmation and discovery through 13C-labeling of proteinogenic amino acids.
Zhang, Y. Cell growth and protein expression of Shewanella oneidensis in biofilms and hydrogel-entrapped cultures. Keywords : c-di-GMP, dynamic labeling, Entner-Doudoroff pathway, pyruvate shunt, tubular biofilm reactors. The use, distribution or reproduction in other forums is permitted, provided the original author s and the copyright owner s are credited and that the original publication in this journal is cited, in accordance with accepted academic practice.
No use, distribution or reproduction is permitted which does not comply with these terms. Thus, we are now able to study which genes are transcribed and what proteins are produced at a given point in time. This simultaneous study at the three levels gives us an entirely new picture of the functional processes occurring in the gut, for example in relation to metabolism. The medical professionals with whom Wilmes and his team collaborated see great hope in the new research approach. This includes Prof.
She was instrumental in finding families in which healthy and sick members were willing to participate in the study. Such biomarkers would make diagnosis easier, so that we could already take preventive or therapeutic action at a very early stage. In order to drive the search for these biomarkers, the study must go on, Paul Wilmes asserts. After all, the earlier doctors can intervene, the better they can assure a life with as few limitations as possible. Studies like MUST are crucial for this, as hypothesis generators.
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